1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g051890

Sopen01g051890


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g051890
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Bradi3g41510 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02620.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Brara.C01506.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Brara.E00275.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Brara.G00193.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
GRMZM2G144275 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G146500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G113200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G104200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G051100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s7_37V6 No alias T6L1.10; basic helix-loop-helix (bHLH) family protein... 0.02 Orthogroups_2024-Update
Seita.6G191000.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Seita.9G049500.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Solyc12g098620 No alias bHLH transcription factor 072 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 243 290
No external refs found!