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  5. Sopen01g051940

Sopen01g051940


Description : SNARE domain


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g051940
Cluster HCCA clusters: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
At2g18260 No alias SYP112 [Source:UniProtKB/TrEMBL;Acc:A0A178VPA2] 0.03 Orthogroups_2024-Update
Brara.E03504.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Brara.H02867.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.03 Orthogroups_2024-Update
GRMZM2G357636 No alias syntaxin of plants 131 0.05 Orthogroups_2024-Update
HORVU5Hr1G026120.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Seita.3G347200.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 229 277
IPR006011 Syntaxin_N 42 227
No external refs found!