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  5. Sopen01g053510

Sopen01g053510


Description : Proteasome subunit


Gene families : OG_42_0003830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g053510
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030850 No alias proteasome alpha subunit D2 0.02 Orthogroups_2024-Update
Sobic.002G279000.1 No alias alpha-type-4 component *(PAD) of 26S proteasome & EC_3.4... 0.04 Orthogroups_2024-Update
evm.model.contig_2285.12 No alias (q9sxu1|psa7_cicar : 343.0) Proteasome subunit alpha... 0.02 Orthogroups_2024-Update
evm.model.tig00020830.84 No alias (q9sxu1|psa7_cicar : 343.0) Proteasome subunit alpha... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan predictions
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005839 proteasome core complex IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan predictions
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 27 210
IPR000426 Proteasome_asu_N 4 26
No external refs found!