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Description : PPR repeat family
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen01g054250 | |
| Cluster | HCCA clusters: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 105197 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 105776 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 130453 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_07003 | No alias | pentatricopeptide repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| At1g06140 | No alias | Pentatricopeptide repeat-containing protein At1g06140,... | 0.03 | Orthogroups_2024-Update | |
| At1g16480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| At1g26900 | No alias | Pentatricopeptide repeat-containing protein At1g26900,... | 0.03 | Orthogroups_2024-Update | |
| At3g15930 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g20737 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g27320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi2g22840 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi2g27440 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g37360 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi2g42710 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi2g45110 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g05000 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g52870 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi3g55520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi3g57730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi4g15307 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi4g30190 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
| Bradi4g40340 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi4g42160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi5g13537 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.A03196.1 | No alias | RNA editing factor *(CREF3) | 0.02 | Orthogroups_2024-Update | |
| Brara.F01240.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
| Brara.G01460.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.G02157.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G019689 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G020008 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G022884 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G031588 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G060337 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G073017 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G098869 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G144071 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G158839 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G163396 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G168170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G331779 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G430710 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G456114 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G474929 | No alias | mitochondrial editing factor 21 | 0.02 | Orthogroups_2024-Update | |
| GRMZM5G849971 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G006900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.02G043900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G057300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.05G026400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.07G159200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G141600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.08G294900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G286300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.10G230100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G006200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.13G220450 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G313200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G332400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G016600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.15G084700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.15G273200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.16G035600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G117001 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.19G141800 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G074220.1 | No alias | RNA editing factor *(MEF21) | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G083680.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G053030.5 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G009150.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G093530.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G063760.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g36350 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g49920 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_77675g0010 | No alias | (at4g13650 : 598.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00001719-RA | No alias | (at4g18750 : 701.0) Encodes a pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00005130-RA | No alias | (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... | 0.04 | Orthogroups_2024-Update | |
| PSME_00006107-RA | No alias | (at1g11290 : 668.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| PSME_00011507-RA | No alias | (at2g27610 : 676.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
| PSME_00014659-RA | No alias | (at1g11290 : 712.0) Pentatricopeptide Repeat Protein... | 0.05 | Orthogroups_2024-Update | |
| PSME_00018598-RA | No alias | (at1g11290 : 726.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
| PSME_00035796-RA | No alias | (at1g11290 : 732.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| PSME_00036492-RA | No alias | (at2g22070 : 524.0) pentatricopeptide (PPR)... | 0.05 | Orthogroups_2024-Update | |
| PSME_00038079-RA | No alias | (at3g02010 : 593.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056623-RA | No alias | (at2g03880 : 555.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G019500 | No alias | SLOW GROWTH 1 | 0.03 | Orthogroups_2024-Update | |
| Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.001G322100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.002G075200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.002G155100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Potri.002G214900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.003G031600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.003G088600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.004G124400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.006G211400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.012G048800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.012G135600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.013G152000 | No alias | mitochondrial editing factor 22 | 0.03 | Orthogroups_2024-Update | |
| Potri.014G087100 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.014G097000 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| Potri.016G053500 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
| Potri.016G065500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.016G075000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.017G137200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.2G400300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.3G224300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.4G008500.1 | No alias | RNA editing factor *(CRR22) | 0.03 | Orthogroups_2024-Update | |
| Seita.4G218400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.5G357300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.5G360300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Seita.5G385400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Seita.9G068200.1 | No alias | RNA editing factor *(DEK36) | 0.04 | Orthogroups_2024-Update | |
| Seita.9G151300.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Seita.9G341000.1 | No alias | RNA editing factor *(MEF25) | 0.03 | Orthogroups_2024-Update | |
| Seita.9G355700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G149100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G151300.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G282300.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G312700.1 | No alias | RNA editing factor *(MEF25) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G347100.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G436600.3 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.001G509700.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G513000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G292300.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G358900.3 | No alias | RNA editing factor *(OTP90) | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G384800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.05 | Orthogroups_2024-Update | |
| Sobic.003G277100.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.004G053100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G174800.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G199400.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.004G217900.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G290400.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.005G210700.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.008G009000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G066900.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.008G179000.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G238700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G066900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G067000.1 | No alias | RNA editing factor *(MEF29) | 0.03 | Orthogroups_2024-Update | |
| Solyc01g081290 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g090510 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g091610 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.05 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g100800 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g065030 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
| Solyc02g079260 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g079380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g088650 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc03g006990 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc03g007840 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.05 | Orthogroups_2024-Update | |
| Solyc03g051780 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G57790.2) | 0.04 | Orthogroups_2024-Update | |
| Solyc03g063690 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g097850 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc04g051480 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc04g064750 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc05g023900 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc06g066080 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc06g084580 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc07g005850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
| Solyc07g042760 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc09g009950 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc09g010070 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc09g059580 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g007230 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.04 | Orthogroups_2024-Update | |
| Solyc11g011860 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g040060 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |