Sopen01g054370


Description : Integrase core domain


Gene families : OG_42_0169499 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g054370
Cluster HCCA clusters: Cluster_134


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
BP GO:0015074 DNA integration IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 459 503
IPR013103 RVT_2 838 883
IPR001878 Znf_CCHC 272 286
IPR001584 Integrase_cat-core 519 632
No external refs found!