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  5. Sopen02g001320

Sopen02g001320


Description : PPR repeat family


Gene families : OG_42_0014728 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0014728_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g001320
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Solyc02g005280 No alias Pentatricopeptide repeat superfamily protein, putative... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 142 166
IPR002885 Pentatricopeptide_repeat 345 369
IPR002885 Pentatricopeptide_repeat 171 198
IPR002885 Pentatricopeptide_repeat 445 470
IPR002885 Pentatricopeptide_repeat 370 418
IPR002885 Pentatricopeptide_repeat 269 315
No external refs found!