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  5. Solyc01g110140

Solyc01g110140


Description : Calcium-transporting ATPase (AHRD V3.3 --* A0A0J8EL09_BETVU)


Gene families : OG_42_0000655 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110140
Cluster HCCA clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
409925 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
GRMZM2G108798 No alias Lateral root primordium (LRP) protein-related 0.03 Orthogroups_2024-Update
Potri.001G276200 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
Potri.005G118200 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
Pp1s19_109V6 No alias contains ESTs AU093161(C63864),AU078381(S21490) [Oryza... 0.04 Orthogroups_2024-Update
Seita.4G277500.1 No alias SRS-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!