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  5. Sopen02g002150

Sopen02g002150


Description : Transposase family tnp2


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g002150
Cluster HCCA clusters: Cluster_408

Target Alias Description ECC score Gene Family Method Actions
Brara.J00655.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os10g08190 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g21980 No alias transposon protein, putative, CACTA, En/Spm sub-class, expressed 0.02 Orthogroups_2024-Update
Sopen10g023130 No alias Transposase family tnp2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029480 Transpos_assoc 32 70
IPR004242 Transposase_21 287 498
No external refs found!