Sopen02g003460

Description : NB-ARC domain

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g003460
Cluster	HCCA clusters: Cluster_282

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g36182	No alias	disease resistance protein (TIR-NBS-LRR class)	0.02	Orthogroups_2024-Update
Glyma.01G035800	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.02G030000	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.12G124700	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.13G188300	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
LOC_Os03g63200	No alias	powdery mildew resistance protein PM3b, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g04090	No alias	disease resistance RPP13-like protein 1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g10570	No alias	NBS-LRR disease resistance protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g10770	No alias	disease resistance protein RGA3, putative, expressed	0.02	Orthogroups_2024-Update
Potri.012G032400	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.017G133600	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.8G235200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G071950.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	2	176

External Links

No external refs found!