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  5. Sopen02g003530

Sopen02g003530


Description : Photosynthesis system II assembly factor YCF48


Gene families : OG_42_0006109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g003530
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
A4A49_11603 No alias photosystem ii stabilityassembly factor hcf136, chloroplastic 0.03 Orthogroups_2024-Update
Bradi1g29500 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.02 Orthogroups_2024-Update
Cre06.g273700 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.02 Orthogroups_2024-Update
Glyma.11G100800 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.03 Orthogroups_2024-Update
Glyma.12G026900 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.06 Orthogroups_2024-Update
HORVU7Hr1G120190.6 No alias protein involved in PS-II assembly *(HCF136) 0.03 Orthogroups_2024-Update
Potri.007G071300 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.05 Orthogroups_2024-Update
Pp1s189_18V6 No alias photosystem ii stability assembly factor hcf136 0.07 Orthogroups_2024-Update
Seita.4G289700.1 No alias protein involved in PS-II assembly *(HCF136) 0.09 Orthogroups_2024-Update
Sobic.010G277600.1 No alias protein involved in PS-II assembly *(HCF136) 0.07 Orthogroups_2024-Update
Solyc02g014150 No alias Photosystem II stability/assembly factor HCF136 (AHRD... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 85 404
No external refs found!