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  5. Sopen02g004430

Sopen02g004430


Description : PPR repeat family


Gene families : OG_42_0010889 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010889_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g004430
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Solyc02g011680 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 517 538
IPR002885 Pentatricopeptide_repeat 245 267
IPR002885 Pentatricopeptide_repeat 582 612
IPR002885 Pentatricopeptide_repeat 70 95
IPR002885 Pentatricopeptide_repeat 442 489
IPR002885 Pentatricopeptide_repeat 270 317
IPR002885 Pentatricopeptide_repeat 341 384
IPR002885 Pentatricopeptide_repeat 169 217
No external refs found!