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  5. Solyc01g110560

Solyc01g110560


Description : Small auxin up-regulated RNA3


Gene families : OG_42_0001009 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110560
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Brara.J02266.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G079200 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.07G001700 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Sopen01g052680 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 16 102
No external refs found!