1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen02g006100

Sopen02g006100


Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Gene families : OG_42_0002471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002471_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g006100
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Bradi2g43460 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
GRMZM2G049866 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
GRMZM5G803433 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
PSME_00009333-RA No alias (at3g56860 : 206.0) encodes a nuclear protein that binds... 0.02 Orthogroups_2024-Update
Potri.006G190900 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Seita.5G225200.1 No alias regulatory protein *(UBA1/2) of UBP1 activity 0.03 Orthogroups_2024-Update
Solyc02g021560 No alias RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD... 0.06 Orthogroups_2024-Update
Solyc12g014210 No alias RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 174 230
IPR000504 RRM_dom 83 150
No external refs found!