Description : Small auxin up-regulated RNA9
Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc01g110630 | |
Cluster | HCCA clusters: Cluster_204 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.06G006700 | No alias | SAUR-like auxin-responsive protein family | 0.03 | Orthogroups_2024-Update | |
Potri.004G165000 | No alias | SAUR-like auxin-responsive protein family | 0.02 | Orthogroups_2024-Update | |
Pp1s339_29V6 | No alias | indole-3-acetic acid-induced protein | 0.02 | Orthogroups_2024-Update | |
Solyc01g110590 | No alias | Small auxin up-regulated RNA6 | 0.05 | Orthogroups_2024-Update | |
Solyc01g110720 | No alias | SAUR-like auxin-responsive protein family (AHRD V3.3 ***... | 0.04 | Orthogroups_2024-Update | |
Solyc01g110860 | No alias | SAUR-like auxin-responsive protein family (AHRD V3.3 ***... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009733 | response to auxin | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Predicted GO |
MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predicted GO |
MF | GO:0030570 | pectate lyase activity | IEP | Predicted GO |
MF | GO:0043531 | ADP binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003676 | SAUR_fam | 27 | 104 |
No external refs found! |