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  5. Solyc01g110680

Solyc01g110680


Description : Small auxin up-regulated RNA12


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110680
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
A4A49_00884 No alias auxin-induced protein 15a 0.03 Orthogroups_2024-Update
A4A49_10173 No alias auxin-induced protein x15 0.03 Orthogroups_2024-Update
A4A49_22886 No alias auxin-induced protein 15a 0.02 Orthogroups_2024-Update
A4A49_57497 No alias auxin-responsive protein saur21 0.04 Orthogroups_2024-Update
At2g18010 No alias Protein SMALL AUXIN UP-REGULATED RNA 10... 0.03 Orthogroups_2024-Update
At2g21210 No alias SAUR-like auxin-responsive protein family... 0.03 Orthogroups_2024-Update
At3g51200 No alias SAUR-like auxin-responsive protein family... 0.03 Orthogroups_2024-Update
At4g38840 No alias At4g38840 [Source:UniProtKB/TrEMBL;Acc:Q9T0J2] 0.04 Orthogroups_2024-Update
At4g38850 No alias Auxin-responsive protein SAUR15... 0.05 Orthogroups_2024-Update
At4g38860 No alias At4g38860 [Source:UniProtKB/TrEMBL;Acc:Q9T0J3] 0.04 Orthogroups_2024-Update
At5g18060 No alias SAUR23 [Source:UniProtKB/TrEMBL;Acc:A0A178UM65] 0.04 Orthogroups_2024-Update
Brara.B00757.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.C00795.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F03900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01759.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01764.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.06G279500 No alias SAUR-like auxin-responsive protein family 0.01 Orthogroups_2024-Update
Glyma.09G221800 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Glyma.12G035700 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
HORVU7Hr1G017790.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_10431311g0020 No alias (at2g21220 : 99.0) SAUR-like auxin-responsive protein... 0.02 Orthogroups_2024-Update
MA_68930g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_7654907g0010 No alias (at4g34760 : 95.9) SAUR-like auxin-responsive protein... 0.02 Orthogroups_2024-Update
MA_8179811g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s310_61V6 No alias saur family protein 0.04 Orthogroups_2024-Update
Solyc01g110940 No alias SAUR-like auxin-responsive protein family (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc10g054720 No alias Small auxin up-regulated RNA78 0.05 Orthogroups_2024-Update
Sopen01g052850 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update
Sopen01g052980 No alias Auxin responsive protein 0.07 Orthogroups_2024-Update
Sopen03g006370 No alias Auxin responsive protein 0.04 Orthogroups_2024-Update
Sopen10g023300 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 67 140
No external refs found!