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  5. Solyc01g110770

Solyc01g110770


Description : Small auxin up-regulated RNA11


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110770
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
A4A49_10173 No alias auxin-induced protein x15 0.03 Orthogroups_2024-Update
A4A49_28949 No alias indole-3-acetic acid-induced protein arg7 0.04 Orthogroups_2024-Update
Bradi1g34240 No alias SAUR-like auxin-responsive protein family 0.02 Orthogroups_2024-Update
Brara.G03361.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01618.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00329.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G155300 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.08G155800 No alias SAUR-like auxin-responsive protein family 0.04 Orthogroups_2024-Update
Glyma.09G221200 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.12G035100 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.12G035300 No alias SAUR-like auxin-responsive protein family 0.05 Orthogroups_2024-Update
HORVU7Hr1G017790.1 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_10431311g0020 No alias (at2g21220 : 99.0) SAUR-like auxin-responsive protein... 0.04 Orthogroups_2024-Update
MA_51912g0030 No alias (at2g18010 : 91.3) SAUR-like auxin-responsive protein... 0.02 Orthogroups_2024-Update
MA_609739g0010 No alias (at4g34760 : 98.2) SAUR-like auxin-responsive protein... 0.03 Orthogroups_2024-Update
MA_7654907g0010 No alias (at4g34760 : 95.9) SAUR-like auxin-responsive protein... 0.03 Orthogroups_2024-Update
Potri.002G024300 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Potri.004G165000 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Sopen01g052710 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update
Sopen01g052980 No alias Auxin responsive protein 0.09 Orthogroups_2024-Update
Sopen03g006370 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 9 80
No external refs found!