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  5. Solyc01g110820

Solyc01g110820


Description : RNA binding protein, putative (AHRD V3.3 *** B9SHJ5_RICCO)


Gene families : OG_42_0006526 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110820
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G042800 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Glyma.19G109200 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 23 88
IPR000504 RRM_dom 361 434
No external refs found!