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  5. Solyc01g110860

Solyc01g110860


Description : SAUR-like auxin-responsive protein family (AHRD V3.3 *** AT4G34770.1)


Gene families : OG_42_0000038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g110860
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Brara.B00757.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C00795.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.06G006000 No alias SAUR-like auxin-responsive protein family 0.05 Orthogroups_2024-Update
Glyma.06G279500 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.06G282900 No alias SAUR-like auxin-responsive protein family 0.05 Orthogroups_2024-Update
Glyma.08G155400 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.09G219300 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.09G219600 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.09G221700 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Glyma.12G034200 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
HORVU7Hr1G017790.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.004G165100 No alias SAUR-like auxin-responsive protein family 0.03 Orthogroups_2024-Update
Seita.7G023100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g110630 No alias Small auxin up-regulated RNA9 0.05 Orthogroups_2024-Update
Solyc01g110670 No alias SAUR-like auxin-responsive protein family (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g054760 No alias Small auxin up-regulated RNA80 0.03 Orthogroups_2024-Update
Sopen01g052710 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update
Sopen01g053040 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update
Sopen01g053050 No alias Auxin responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003676 SAUR_fam 26 97
No external refs found!