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  5. Sopen02g009400

Sopen02g009400


Description : WD domain, G-beta repeat


Gene families : OG_42_0005652 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005652_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g009400
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Brara.J02245.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre12.g538500 No alias transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G054880.13 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp5g00060.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
evm.model.contig_611.2 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00000123.23 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007148 SSU_processome_Utp12 463 556
IPR001680 WD40_repeat 188 226
IPR001680 WD40_repeat 11 33
No external refs found!