Solyc01g110950

Description : LOW QUALITY:DWNN domain, a CCHC-type zinc finger (AHRD V3.3 *-* AT5G47430.3)

Gene families : OG_42_0001891 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001891_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g110950
Cluster	HCCA clusters: Cluster_244

Target	Alias	Description	ECC score	Gene Family Method	Actions
Kfl00059_0250	kfl00059_0250_v1.1	(at5g47430 : 281.0) DWNN domain, a CCHC-type zinc...	0.03	Orthogroups_2024-Update
Sopen10g032620	No alias	DWNN domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR014891	DWNN_domain	9	81
IPR025829	Zn_knuckle_CX2CX3GHX4C	184	203

External Links

No external refs found!