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  5. Solyc01g009160

Solyc01g009160


Description : harpin-induced1-like


Gene families : OG_42_0000666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g009160
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
A4A49_03204 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_10969 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.B01628.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU1Hr1G044080.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g23460 No alias harpin-induced protein 1 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_14231g0010 No alias (at1g65690 : 121.0) Late embryogenesis abundant (LEA)... 0.04 Orthogroups_2024-Update
Mp3g02160.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00045192-RA No alias (at1g54540 : 127.0) Late embryogenesis abundant (LEA)... 0.02 Orthogroups_2024-Update
Potri.013G135800 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Seita.3G015800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G155000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G182000.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 144 246
No external refs found!