Sopen02g011760

Description : Autophagy protein Apg5

Gene families : OG_42_0006677 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006677_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g011760
Cluster	HCCA clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
A4A49_37408	No alias	autophagy protein 5	0.01	Orthogroups_2024-Update
Brara.J01820.1	No alias	regulatory factor *(ATG5) of autophagosome	0.03	Orthogroups_2024-Update
Solyc02g036380	No alias	Autophagy protein 5 (AHRD V3.3 *** K4B5T1_SOLLC)	0.04	Orthogroups_2024-Update
Solyc06g043140	No alias	Autophagy protein 5 (AHRD V3.3 *** K4C567_SOLLC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	InterProScan predictions
BP	GO:0006914	autophagy	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007239	Atg5	105	382

External Links

No external refs found!