Description : Retroviral aspartyl protease
Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen02g012310 | |
Cluster | HCCA clusters: Cluster_213 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre08.g358542 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
Cre34.g759147 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
LOC_Os08g26650 | No alias | retrotransposon, putative, centromere-specific, expressed | 0.02 | Orthogroups_2024-Update | |
Sopen02g004560 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen02g011110 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen04g009770 | No alias | Integrase core domain | 0.06 | Orthogroups_2024-Update | |
Sopen05g010930 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen06g016840 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen10g015090 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
Sopen10g021770 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen11g009630 | No alias | Integrase core domain | 0.03 | Orthogroups_2024-Update | |
Sopen11g023740 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen12g011680 | No alias | Reverse transcriptase (RNA-dependent DNA polymerase) | 0.03 | Orthogroups_2024-Update | |
Sopen12g011740 | No alias | Integrase core domain | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
BP | GO:0015074 | DNA integration | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |