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  5. Sopen02g012810

Sopen02g012810


Description : Chitinase class I


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g012810
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Mp5g02510.1 No alias no description available(sp|q949h3|chi1_hevbr : 195.0) 0.03 Orthogroups_2024-Update
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.03 Orthogroups_2024-Update
PSME_00054972-RA No alias (p17514|chiq_tobac : 181.0) Acidic endochitinase Q... 0.03 Orthogroups_2024-Update
Potri.014G111800 No alias Chitinase family protein 0.02 Orthogroups_2024-Update
Pp1s134_173V6 No alias chitinase 0.03 Orthogroups_2024-Update
Pp1s309_77V6 No alias chitinase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 25 256
No external refs found!