Sopen02g013250

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0001272 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g013250
Cluster	HCCA clusters: Cluster_389

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os07g08320	No alias	RNA recognition motif containing protein, expressed	0.02	Orthogroups_2024-Update
PSME_00035988-RA	No alias	(at2g44710 : 321.0) RNA-binding (RRM/RBD/RNP motifs)...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	801	870
IPR000504	RRM_dom	623	691
IPR000504	RRM_dom	703	767

External Links

No external refs found!