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  5. Sopen02g013360

Sopen02g013360


Description : Plus-3 domain


Gene families : OG_42_0000694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g013360
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
A4A49_08530 No alias uncharacterized protein 0.03 Orthogroups_2024-Update
At2g18090 No alias PHD finger family protein / SWIB complex BAF60b... 0.03 Orthogroups_2024-Update
At3g51120 No alias DNA binding;zinc ion binding;nucleic acid... 0.04 Orthogroups_2024-Update
At5g08430 No alias Uncharacterized protein At5g08430... 0.03 Orthogroups_2024-Update
At5g63700 No alias Zinc ion binding / DNA binding protein... 0.03 Orthogroups_2024-Update
LOC_Os10g36810 No alias plus-3 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.007G016001 No alias DNA binding;zinc ion binding;nucleic acid... 0.02 Orthogroups_2024-Update
Pp1s258_72V6 No alias No description available 0.01 Orthogroups_2024-Update
Solyc02g062360 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 363 436
IPR004343 Plus-3_dom 503 605
No external refs found!