Solyc01g111380


Description : Actin-depolymerizing factor (AHRD V3.3 *** A0A151TUH5_CAJCA)


Gene families : OG_42_0000295 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g111380
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Brara.B01059.1 No alias actin-depolymerizing factor 0.04 Orthogroups_2024-Update
LOC_Os10g37670 No alias actin-depolymerizing factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g43340 No alias actin-depolymerizing factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G125500 No alias actin depolymerizing factor 8 0.03 Orthogroups_2024-Update
Potri.010G208500 No alias actin depolymerizing factor 4 0.03 Orthogroups_2024-Update
Seita.1G263200.1 No alias actin-depolymerizing factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002108 ADF-H 18 140
No external refs found!