Sopen02g014810

Description : Transcriptional regulator of RNA polII, SAGA, subunit

Gene families : OG_42_0000854 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000854_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g014810
Cluster	HCCA clusters: Cluster_356

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04369	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
At2g14850	No alias	Transcriptional regulator of RNA polII, SAGA, subunit...	0.04	Orthogroups_2024-Update
Glyma.17G198400	No alias	Function unknown	0.02	Orthogroups_2024-Update
LOC_Os04g21650	No alias	expressed protein	0.02	Orthogroups_2024-Update
Seita.3G365900.1	No alias	component *(ADA1) of SAGA transcription co-activator complex	0.02	Orthogroups_2024-Update
Solyc02g064710	No alias	transcriptional regulator of RNA polII, SAGA, subunit...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	InterProScan predictions
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	7	255

External Links

No external refs found!