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  5. Solyc01g111470

Solyc01g111470


Description : Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061FPD8_THECC)


Gene families : OG_42_0010068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g111470
Cluster HCCA clusters: Cluster_276


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 555 603
IPR002885 Pentatricopeptide_repeat 140 180
IPR002885 Pentatricopeptide_repeat 415 460
IPR002885 Pentatricopeptide_repeat 626 672
IPR002885 Pentatricopeptide_repeat 486 534
IPR002885 Pentatricopeptide_repeat 240 289
IPR002885 Pentatricopeptide_repeat 345 394
IPR002885 Pentatricopeptide_repeat 209 238
IPR002885 Pentatricopeptide_repeat 309 339
No external refs found!