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  5. Sopen02g014900

Sopen02g014900


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g014900

Target Alias Description ECC score Gene Family Method Actions
Cre03.g183950 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 Orthogroups_2024-Update
LOC_Os01g52000 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g41690 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g01440 No alias retrotransposon protein, putative, Ty1-copia subclass 0.02 Orthogroups_2024-Update
LOC_Os11g29950 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Pp1s132_22V6 No alias No description available 0.02 Orthogroups_2024-Update
Solyc06g011420 No alias No description available 0.03 Orthogroups_2024-Update
Solyc09g015410 No alias No description available 0.02 Orthogroups_2024-Update
Solyc09g056140 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g012650 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen02g009580 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen03g020190 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen04g025610 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen05g024300 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen06g009400 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen06g016250 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g017070 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen11g013360 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen11g018860 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
evm.model.contig_3584.1 No alias (p10978|polx_tobac : 128.0) Retrovirus-related Pol... 0.03 Orthogroups_2024-Update
evm.model.contig_4573.1 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.contig_577.4 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 171 366
No external refs found!