Solyc01g111530

Description : E3 ubiquitin-protein ligase (AHRD V3.3 *** G7JNF2_MEDTR)

Gene families : OG_42_0001466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g111530
Cluster	HCCA clusters: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method
At4g38600	No alias	E3 ubiquitin-protein ligase UPL3...	0.06	Orthogroups_2024-Update
At5g02880	No alias	E3 ubiquitin-protein ligase UPL4...	0.06	Orthogroups_2024-Update
Seita.7G028700.1	No alias	E3 ubiquitin ligase *(UPL3)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005524	ATP binding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0035091	phosphatidylinositol binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000569	HECT_dom	1530	1860

External Links

No external refs found!