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  5. Sopen02g015710

Sopen02g015710


Description : PPR repeat family


Gene families : OG_42_0008027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g015710
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G063000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Sobic.003G055000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g065510 No alias Pentatricopeptide repeat-containing protein, putative... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 486 514
IPR002885 Pentatricopeptide_repeat 551 598
IPR002885 Pentatricopeptide_repeat 171 219
No external refs found!