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  5. Sopen02g015860

Sopen02g015860


Description : Ring finger domain


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g015860
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
129201 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.03 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.05 Orthogroups_2024-Update
At5g01980 No alias At5g01980 [Source:UniProtKB/TrEMBL;Acc:Q9LZN3] 0.05 Orthogroups_2024-Update
Brara.H02157.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.I05006.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G049346 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.02 Orthogroups_2024-Update
Glyma.10G089800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G043120.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g37230 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g02620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_474338g0010 No alias (at2g39720 : 83.2) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
PSME_00032072-RA No alias (at3g56580 : 108.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.002G083001 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 Orthogroups_2024-Update
Potri.006G217600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G168300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G116000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G055501.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.03 Orthogroups_2024-Update
Solyc10g045180 No alias E3 ubiquitin-protein ligase (AHRD V3.3 --* A0A0F7G5V7_9ROSI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 321 363
No external refs found!