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  5. Sopen02g015980

Sopen02g015980


Description : COBRA-like protein


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g015980
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_15736 No alias protein cobra 0.03 Orthogroups_2024-Update
Bradi1g08130 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Bradi1g59880 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Brara.C04215.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Brara.J01943.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
GRMZM2G109326 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.08G249700 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.18G272000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
LOC_Os07g41320 No alias COBRA-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00044523-RA No alias (q60e70|cobl3_orysa : 712.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
Potri.015G060000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Pp1s44_119V6 No alias protein cobra 0.02 Orthogroups_2024-Update
Seita.9G088500.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Sobic.002G368100.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Solyc01g103860 No alias COBRA-like protein (AHRD V3.3 *** L0AST8_POPTO) 0.03 Orthogroups_2024-Update
Solyc02g065770 No alias COBRA protein (AHRD V3.3 *** K4B708_SOLLC) 0.03 Orthogroups_2024-Update
Solyc02g089120 No alias Protein COBRA (AHRD V3.3 *-* A0A151S444_CAJCA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006918 COBRA_pln 48 211
No external refs found!