Sopen02g016390

Description : KH domain

Gene families : OG_42_0000643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g016390
Cluster	HCCA clusters: Cluster_333

Target	Alias	Description	ECC score	Gene Family Method
Glyma.09G235900	No alias	RNA-binding KH domain-containing protein	0.02	Orthogroups_2024-Update
MA_20325g0010	No alias	(at5g15270 : 298.0) RNA-binding KH domain-containing...	0.03	Orthogroups_2024-Update
Potri.017G114400	No alias	RNA-binding KH domain-containing protein	0.02	Orthogroups_2024-Update
Solyc02g067210	No alias	RNA-binding KH domain-containing protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	140	207
IPR004088	KH_dom_type_1	284	333
IPR004088	KH_dom_type_1	45	98
IPR004088	KH_dom_type_1	369	436

External Links

No external refs found!