Sopen02g016410

Description : Dof domain, zinc finger

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g016410
Cluster	HCCA clusters: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
29563	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
A4A49_00536	No alias	dof zinc finger protein dof5.7	0.05	Orthogroups_2024-Update
A4A49_12086	No alias	cyclic dof factor 2	0.07	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.07	Orthogroups_2024-Update
A4A49_16781	No alias	dof zinc finger protein dof4.6	0.02	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At4g21080	No alias	Dof zinc finger protein DOF4.5...	0.02	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.05	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.05	Orthogroups_2024-Update
Bradi1g73710	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.06	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.F02426.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.G02475.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.I00088.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I02909.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I03146.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.I04266.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G064655	No alias	TARGET OF MONOPTEROS 6	0.06	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
GRMZM2G134545	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.04G168300	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.06G124300	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.11G151497	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Kfl00762_0030	kfl00762_0030_v1.1	(at5g39660 : 127.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
LOC_Os08g38220	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_56828g0010	No alias	(at5g02460 : 145.0) Dof-type zinc finger DNA-binding...	0.02	Orthogroups_2024-Update
PSME_00004776-RA	No alias	(at5g60850 : 127.0) Encodes a zinc finger protein.; OBF...	0.03	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Potri.001G238400	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Potri.003G034200	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.06	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.05	Orthogroups_2024-Update
Potri.012G018700	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.015G048300	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Potri.017G084600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.019G040700	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Pp1s118_226V6	No alias	f-box family protein	0.03	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s199_87V6	No alias	cycling dof factor 2	0.03	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s37_7V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s392_2V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.05	Orthogroups_2024-Update
Seita.3G327800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G259300.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.001G034300.3	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.13	Orthogroups_2024-Update
Solyc02g077950	No alias	Dof zinc finger protein5	0.03	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.03	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.16	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	118	174

External Links

No external refs found!

Sopen02g016410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation