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  5. Solyc01g111660

Solyc01g111660


Description : plasma membrane intrinsic protein 2.8


Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g111660
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G089940.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
Potri.005G109300 No alias plasma membrane intrinsic protein 2;8 0.03 Orthogroups_2024-Update
Sopen12g028730 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 56 286
No external refs found!