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  5. Sopen02g016820

Sopen02g016820


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g016820
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
A4A49_20151 No alias putative ring-h2 finger protein atl61 0.02 Orthogroups_2024-Update
At1g20823 No alias RING-H2 finger protein ATL80... 0.03 Orthogroups_2024-Update
At2g27940 No alias RING-H2 finger protein ATL57... 0.03 Orthogroups_2024-Update
At3g14320 No alias Putative RING-H2 finger protein ATL61... 0.02 Orthogroups_2024-Update
At3g62690 No alias RING-H2 zinc finger protein ATL5... 0.04 Orthogroups_2024-Update
At5g47610 No alias At5g47610 [Source:UniProtKB/TrEMBL;Acc:Q1H5E6] 0.03 Orthogroups_2024-Update
Bradi1g60390 No alias hypoxia-responsive family protein / zinc finger... 0.03 Orthogroups_2024-Update
Bradi2g50200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g37430 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g09830 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g11880 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.A03044.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.A03822.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03092.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E01533.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F03530.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G00267.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G004480 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G340444 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G140700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G172300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G191800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G014700 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G014500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G059020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G028440.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU5Hr1G074300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G009820.3 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G051480.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G051510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU6Hr1G077610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
LOC_Os01g60730 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g15010 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g52210 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g09310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g34870 No alias Zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g39450 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02210 No alias RING finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g02350 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10260361g0010 No alias (at3g18930 : 142.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_1143g0010 No alias (at1g49230 : 105.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_189618g0010 No alias (at1g49230 : 127.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_226198g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_8693914g0010 No alias (at5g05280 : 130.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.003G093100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s213_71V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s460_19V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Seita.1G004900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G327300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.3G074900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.8G032100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G063900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G109200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G109300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.005G012100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G036400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g105620 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc01g109200 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DYT2_THECC) 0.03 Orthogroups_2024-Update
Sopen01g037550 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g005110 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00000821.27 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 73 116
No external refs found!