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  5. Sopen02g016880

Sopen02g016880


Description : Myb-like DNA-binding domain


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g016880
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Bradi2g62510 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi3g52260 No alias myb domain protein 58 0.03 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Brara.A02585.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.I03072.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G001223 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Glyma.18G071600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Kfl00279_0100 kfl00279_0100_v1.... (at1g18570 : 127.0) Encodes a member of the R2R3-MYB... 0.02 Orthogroups_2024-Update
LOC_Os05g41166 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00010776-RA No alias (at1g22640 : 177.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.9G074800.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Solyc12g096200 No alias R2R3MYB transcription factor 6 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 110
No external refs found!