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  5. Sopen02g016910

Sopen02g016910


Description : Protein of unknown function DUF260


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g016910
Cluster HCCA clusters: Cluster_384

Target Alias Description ECC score Gene Family Method Actions
Brara.F00482.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G079185 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
GRMZM2G133806 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.08G192600 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Glyma.15G127900 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
HORVU3Hr1G088440.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
Potri.018G052700 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Pp1s156_26V6 No alias T2P4.18; LOB domain protein 15 / lateral organ... 0.02 Orthogroups_2024-Update
Sobic.009G025900.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc06g050430 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen03g031510 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update
Sopen06g022110 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 11 107
No external refs found!