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  5. Solyc01g111720

Solyc01g111720


Description : Translation initiation factor if-3, putative (AHRD V3.3 *** B9RJ84_RICCO)


Gene families : OG_42_0006925 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006925_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc01g111720
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Sopen01g053760 No alias Translation initiation factor IF-3, N-terminal domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA InterProScan predictions
BP GO:0006413 translational initiation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR019815 Translation_initiation_fac_3_C 208 285
IPR019814 Translation_initiation_fac_3_N 128 193
No external refs found!