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  5. Sopen02g017690

Sopen02g017690


Description : FAR1 DNA-binding domain


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g017690
Cluster HCCA clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
A4A49_48160 No alias protein far1-related sequence 6 0.02 Orthogroups_2024-Update
Bradi3g28642 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Brara.E02013.1 No alias transcriptional regulator of red/far-red light... 0.04 Orthogroups_2024-Update
GRMZM2G148940 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G028850.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G030190.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g01950 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g10840 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g25100 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g40310 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.004G209100 No alias FAR1-related sequence 9 0.02 Orthogroups_2024-Update
Potri.006G020700 No alias far-red elongated hypocotyls 3 0.03 Orthogroups_2024-Update
Potri.016G018100 No alias FAR1-related sequence 2 0.02 Orthogroups_2024-Update
Sobic.001G016600.3 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc08g060840 No alias FAR1 (AHRD V3.3 *** A0A178UYQ0_ARATH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 604 638
IPR018289 MULE_transposase_dom 323 416
IPR004330 FAR1_DNA_bnd_dom 100 206
No external refs found!