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  5. Sopen02g018610

Sopen02g018610


Description : von Willebrand factor type A domain


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g018610
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_36924 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi3g54750 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G088110.10 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g40664 No alias zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_129331g0010 No alias (at5g60710 : 474.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
MA_218345g0010 No alias (at2g38970 : 115.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
PSME_00047144-RA No alias (at2g38970 : 509.0) Zinc finger (C3HC4-type RING finger)... 0.04 Orthogroups_2024-Update
PSME_00049504-RA No alias (at5g60710 : 408.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
PSME_00054741-RA No alias (at5g60710 : 502.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
Potri.003G148400 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Potri.009G010350 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Seita.1G358800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G226900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G508600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 63 92
IPR002035 VWF_A 230 428
IPR032838 Vwaint_dom 602 683
No external refs found!