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  5. Sopen02g019020

Sopen02g019020


Description : CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B


Gene families : OG_42_0000352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g019020
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_27315 No alias nuclear transcription factor y subunit a-3 0.04 Orthogroups_2024-Update
At1g30500 No alias Nuclear transcription factor Y subunit A-7... 0.03 Orthogroups_2024-Update
At2g34720 No alias Nuclear transcription factor Y subunit A-4... 0.03 Orthogroups_2024-Update
At5g12840 No alias Nuclear transcription factor Y subunit A-1... 0.05 Orthogroups_2024-Update
Bradi1g11800 No alias nuclear factor Y, subunit A9 0.04 Orthogroups_2024-Update
Brara.C00532.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update
Brara.E00954.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.05 Orthogroups_2024-Update
Brara.E01518.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update
Brara.E02111.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.03 Orthogroups_2024-Update
Brara.H00096.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Brara.J02142.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Brara.J02572.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Glyma.03G203000 No alias nuclear factor Y, subunit A10 0.03 Orthogroups_2024-Update
Glyma.13G107900 No alias nuclear factor Y, subunit A3 0.03 Orthogroups_2024-Update
Glyma.14G010000 No alias nuclear factor Y, subunit A9 0.02 Orthogroups_2024-Update
LOC_Os12g41880 No alias nuclear transcription factor Y subunit, putative, expressed 0.05 Orthogroups_2024-Update
MA_10431570g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.016G068200 No alias nuclear factor Y, subunit A10 0.02 Orthogroups_2024-Update
Seita.3G394900.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update
Seita.9G155700.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.02 Orthogroups_2024-Update
Sobic.008G168300.1 No alias component *(NF-YA) of NF-Y transcription factor complex 0.07 Orthogroups_2024-Update
Solyc02g069860 No alias Nuclear transcription factor Y subunit (AHRD V3.3 *-*... 0.21 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001289 NFYA 116 171
No external refs found!