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  5. Solyc01g111890

Solyc01g111890


Description : F-box family protein (AHRD V3.3 *** B9HR17_POPTR)


Gene families : OG_42_0004061 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g111890
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Potri.011G169800 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!