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  5. Sopen02g019250

Sopen02g019250


Description : Berberine and berberine like


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g019250

Target Alias Description ECC score Gene Family Method Actions
AC203909.3_FG007 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
At1g26400 No alias Berberine bridge enzyme-like 5... 0.04 Orthogroups_2024-Update
Bradi3g09380 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Bradi4g18970 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Bradi5g17300 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Brara.I02786.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.09G027300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G089160.3 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
MA_10428737g0020 No alias (at5g44380 : 85.1) FAD-binding Berberine family protein;... 0.03 Orthogroups_2024-Update
MA_186285g0010 No alias (at1g30760 : 375.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
Potri.011G158100 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Potri.011G162732 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Solyc02g069690 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44400.1) 0.03 Orthogroups_2024-Update
Solyc02g070110 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.02 Orthogroups_2024-Update
Solyc10g054460 No alias FAD-binding Berberine family protein, putative (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 3 111
IPR012951 BBE 366 424
No external refs found!