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  5. Sopen02g019540

Sopen02g019540


Description : Glycosyl hydrolases family 17


Gene families : OG_42_0000462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g019540
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
34456 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
A4A49_04246 No alias glucan endo-1,3-beta-glucosidase 14 0.08 Orthogroups_2024-Update
Bradi1g36460 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Brara.A03104.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
HORVU4Hr1G063240.5 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
PSME_00034311-RA No alias (at2g27500 : 371.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Seita.5G390300.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc06g073710 No alias Glucan endo-1,3-beta-glucosidase 14 (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc11g071520 No alias Glucan endo-1,3-beta-glucosidase (AHRD V3.3 *** A0A072VNE5_MEDTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 8 324
No external refs found!