Sopen02g019720


Description : Ribosomal L18ae/LX protein domain


Gene families : OG_42_0001510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g019720
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
227198 No alias Ribosomal protein L18ae/LX family protein 0.03 Orthogroups_2024-Update
A4A49_41727 No alias 60s ribosomal protein l18a 0.04 Orthogroups_2024-Update
A4A49_56604 No alias 60s ribosomal protein l18a 0.03 Orthogroups_2024-Update
At3g14600 No alias 60S ribosomal protein L18a-3... 0.03 Orthogroups_2024-Update
Bradi2g16430 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
Bradi2g46010 No alias Ribosomal protein L18ae/LX family protein 0.08 Orthogroups_2024-Update
Bradi2g50020 No alias Ribosomal protein L18ae/LX family protein 0.03 Orthogroups_2024-Update
Brara.C01744.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03533.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.D02096.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.E00977.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.E02666.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre01.g047750 No alias Ribosomal protein L18ae/LX family protein 0.06 Orthogroups_2024-Update
GRMZM2G022619 No alias Ribosomal protein L18ae/LX family protein 0.04 Orthogroups_2024-Update
Glyma.14G029901 No alias Ribosomal protein L18ae/LX family protein 0.06 Orthogroups_2024-Update
Glyma.15G095400 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
Glyma.18G110000 No alias Ribosomal protein L18ae/LX family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G088040.2 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
LOC_Os01g47660 No alias 60S ribosomal protein L18a, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.05 Orthogroups_2024-Update
PSME_00023758-RA No alias (q943f3|rl18a_orysa : 335.0) 60S ribosomal protein L18a... 0.03 Orthogroups_2024-Update
Potri.002G057600 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
Pp1s184_111V6 No alias 60s ribosomal protein l18a 0.05 Orthogroups_2024-Update
Pp1s44_13V6 No alias 60s ribosomal protein l18a 0.03 Orthogroups_2024-Update
Pp1s56_243V6 No alias 60s ribosomal protein l18a 0.03 Orthogroups_2024-Update
Pp1s74_193V6 No alias 60s ribosomal protein l18a 0.05 Orthogroups_2024-Update
Seita.3G145500.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.5G262600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.8G085600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.003G249700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.005G091700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.009G233400.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Solyc02g070640 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.07 Orthogroups_2024-Update
Solyc02g070650 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.07 Orthogroups_2024-Update
Solyc06g065590 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4C7I8_SOLLC) 0.07 Orthogroups_2024-Update
Solyc08g016180 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4CJE2_SOLLC) 0.04 Orthogroups_2024-Update
Sopen08g006530 No alias Ribosomal L18ae/LX protein domain 0.05 Orthogroups_2024-Update
evm.model.contig_448.2 No alias (q943f3|rl18a_orysa : 186.0) 60S ribosomal protein L18a... 0.07 Orthogroups_2024-Update
evm.model.tig00000615.59 No alias (at1g29970 : 221.0) 60S ribosomal protein L18A-1;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 7 128
No external refs found!