1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g112000

Solyc01g112000


Description : expansin-like protein precursor 1


Gene families : OG_42_0003075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g112000
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G052290.1 No alias alpha-like-class expansin 0.04 Orthogroups_2024-Update
LOC_Os03g04020 No alias expansin precursor, putative, expressed 0.04 Orthogroups_2024-Update
Seita.9G339600.1 No alias alpha-like-class expansin 0.02 Orthogroups_2024-Update
Sobic.001G311000.1 No alias alpha-like-class expansin 0.03 Orthogroups_2024-Update
Sopen01g054050 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 145 227
IPR009009 RlpA-like_DPBB 57 132
No external refs found!