Sopen02g020230

Description : Double-stranded DNA-binding domain

Gene families : OG_42_0005829 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005829_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g020230
Cluster	HCCA clusters: Cluster_286

Target	Alias	Description	ECC score	Gene Family Method
Glyma.08G082100	No alias	double-stranded DNA-binding family protein	0.03	Orthogroups_2024-Update
Kfl01108_0020	kfl01108_0020_v1.1	(at1g29850 : 111.0) double-stranded DNA-binding family...	0.02	Orthogroups_2024-Update
Seita.3G160600.1	No alias	Prgrammed Cell Death regulatory factor *(PDCD5)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002836	PDCD5-like	9	120

External Links

No external refs found!